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Record detail

One row in GLEAM-DB is one paper (PubMed) × one query variant. This page shows structured labels and provenance for that record, not a final variant classification.

Record identity

Record ID
d724e38a114113915013c64d
Release version
webdb_threshold_completion_missing10_20260508
PMID
40682330 PubMed
Title
Biallelic Mutations in the Otogelin-Like Gene (OTOGL) Associated With Congenital Non-Syndromic Sensorineural Hearing Loss in a Chinese Family.
Journal
Molecular genetics & genomic medicine
Year
2025
DOI
10.1002/mgg3.70122
PMC
PMC12274630 PMC

Variant information

This section prioritizes normalized variant expressions where available. Non-standard source strings are not shown as canonical HGVS.

Gene
OTOGL
Query variant
NM_001378609.3:c.442A>G
Normalized c.HGVS
c.442A>G
Normalized p.HGVS
p.(Ile148Val)
Representative genomic HGVS
CM000674.1:g.80615978A>G
Genomic HGVS aliases
CM000674.1:g.80615978A>G; CM000674.2:g.80222198A>G; NC_000012.10:g.79140109A>G; NC_000012.11:g.80615978A>G; NC_000012.12:g.80222198A>G; NG_033008.1:g.17746A>G

CoGenEx-PM3 evidence

Evidence status is assigned at the PMID × variant level and should not be interpreted as a final variant-level pathogenicity classification.

Evidence status
Phase-confirmed PM3 evidence
Query-evidence confidence
High confidence
Exact query c.HGVS was found in retained evidence.
Phase-confirmed PM3 evidence
Yes
Phase-unconfirmed biallelic evidence
Yes
Other patient-level evidence
No
PM3 context
Confirmed in trans with p.Phe319del
PM3 evidence items
2
Allelic configuration type
Confirmed in trans

Retained partner variants

Partner variants are retained structured tokens from CoGenEx-PM3 evidence items. They are not transcript-normalized in this release.

Candidate context and target validation

Candidate context windows are places selected for audit because the query or its aliases may be relevant. They are not the same as a validated match to the target c.HGVS or p.HGVS expression.

Candidate context
Candidate context retained: 9 text windows and 1 table window
Context status
Found in final retained audit context
Text candidate windows
9
Table candidate windows
1
Target c.HGVS validated
Yes
Target p.HGVS validated
Yes
Target validation
Target variant matched with phase-confirmed PM3 evidence

Source provenance

Reviewed source
Main article
Supplement used by audit
No
Supplement available
No
Reviewed document format
NXML/JATS full text
Evidence context scope
Expanded audit context
Evidence location
Main article

Source links and copyright boundary

Use the PMID, PMC and DOI links above to inspect the source publication where access is permitted. GLEAM-DB redistributes structured metadata, evidence labels and provenance fields only; it does not redistribute copyrighted full text, supplementary tables, copied source tables, long evidence contexts, raw source documents, raw LLM outputs or internal processing logs.

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