Record detail
One row in GLEAM-DB is one paper (PubMed) × one query variant. This page shows structured labels and provenance for that record, not a final variant classification.
Record identity
- Record ID
93cd376f2cb522d36a1f8384- Release version
- webdb_threshold_completion_missing10_20260508
- PMID
40425997PubMed- Title
- Clinical features, course, and risk factors of infection-associated secondary hemophagocytic lymphohistiocytosis.
- Journal
- Infection
- Year
- 2025
- DOI
- 10.1007/s15010-025-02559-z
- PMC
PMC12460370PMC
Variant information
This section prioritizes normalized variant expressions where available. Non-standard source strings are not shown as canonical HGVS.
- Gene
- PRF1
- Query variant
NM_001083116.3:c.208G>A- Normalized c.HGVS
- c.208G>A
- Normalized p.HGVS
- p.(Asp70Asn)
- Representative genomic HGVS
- CM000672.1:g.72360451C>T
- Genomic HGVS aliases
- CM000672.1:g.72360451C>T; CM000672.2:g.70600695C>T; LRG_94:g.7081G>A; NC_000010.10:g.72360451C>T; NC_000010.11:g.70600695C>T; NC_000010.9:g.72030457C>T; and 1 more
CoGenEx-PM3 evidence
Evidence status is assigned at the PMID × variant level and should not be interpreted as a final variant-level pathogenicity classification.
- Evidence status
- Phase-unconfirmed biallelic evidence
- Query-evidence confidence
-
Needs review
Llm Review Not Conclusive For Removal
- Phase-confirmed PM3 evidence
- No
- Phase-unconfirmed biallelic evidence
- Yes
- Other patient-level evidence
- No
- PM3 context
- Homozygous for query variant
- PM3 evidence items
- 1
- Allelic configuration type
- Homozygous evidence
No retained PM3 partner variant was recorded for this PMID × variant pair.
Candidate context and target validation
Candidate context windows are places selected for audit because the query or its aliases may be relevant. They are not the same as a validated match to the target c.HGVS or p.HGVS expression.
- Candidate context
- Candidate context retained: 6 text windows and 3 table windows
- Context status
- Found in final retained audit context
- Text candidate windows
- 6
- Table candidate windows
- 3
- Target c.HGVS validated
- No
- Target p.HGVS validated
- No
- Target validation
- Target variant matched with phase-unconfirmed biallelic evidence
Source provenance
- Reviewed source
- Main article
- Supplement used by audit
- No
- Supplement available
- No
- Reviewed document format
- NXML/JATS full text
- Evidence context scope
- Expanded audit context
- Evidence location
- Main article
Source links and copyright boundary
Use the PMID, PMC and DOI links above to inspect the source publication where access is permitted. GLEAM-DB redistributes structured metadata, evidence labels and provenance fields only; it does not redistribute copyrighted full text, supplementary tables, copied source tables, long evidence contexts, raw source documents, raw LLM outputs or internal processing logs.