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Record detail

One row in GLEAM-DB is one paper (PubMed) × one query variant. This page shows structured labels and provenance for that record, not a final variant classification.

Record identity

Record ID
6d8b09cb17434fbb497bc9e1
Release version
webdb_threshold_completion_missing10_20260508
PMID
39684258 PubMed
Title
Comprehensive Clinical Genetics, Molecular and Pathological Evaluation Efficiently Assist Diagnostics and Therapy Selection in Breast Cancer Patients with Hereditary Genetic Background.
Journal
International journal of molecular sciences
Year
2024
DOI
10.3390/ijms252312546
PMC
PMC11641531 PMC

Variant information

This section prioritizes normalized variant expressions where available. Non-standard source strings are not shown as canonical HGVS.

Gene
BRIP1
Query variant
NM_032043.3:c.3525dup
Normalized c.HGVS
c.3525dup
Normalized p.HGVS
p.(Ile1176TyrfsTer13)
Representative genomic HGVS
CM000679.1:g.59760882dup
Genomic HGVS aliases
CM000679.1:g.59760882dup; CM000679.2:g.61683521dup; LRG_300:g.185039dup; NC_000017.10:g.59760882dup; NC_000017.11:g.61683521dup; NC_000017.9:g.57115664dup; and 1 more

CoGenEx-PM3 evidence

Evidence status is assigned at the PMID × variant level and should not be interpreted as a final variant-level pathogenicity classification.

Evidence status
Other Patient-Level Evidence
Query-evidence confidence
Not assessed
This record was not classified by the simple-SNV query-evidence audit.
Phase-confirmed PM3 evidence
No
Phase-unconfirmed biallelic evidence
No
Other patient-level evidence
Yes
PM3 context
Patient-level evidence found, not PM3
PM3 evidence items
0
Allelic configuration type
Other patient-level evidence

No retained PM3 partner variant was recorded for this PMID × variant pair.

Candidate context and target validation

Candidate context windows are places selected for audit because the query or its aliases may be relevant. They are not the same as a validated match to the target c.HGVS or p.HGVS expression.

Candidate context
Candidate context retained: 2 table windows
Context status
Found in final retained audit context
Text candidate windows
0
Table candidate windows
2
Target c.HGVS validated
Yes
Target p.HGVS validated
Yes
Target validation
Target variant matched with other patient-level evidence

Source provenance

Reviewed source
Main article and supplement
Supplement used by audit
Yes
Supplement available
Yes
Reviewed document format
BioC full text
Evidence context scope
Primary audit context
Evidence location
Main+Supp

Source links and copyright boundary

Use the PMID, PMC and DOI links above to inspect the source publication where access is permitted. GLEAM-DB redistributes structured metadata, evidence labels and provenance fields only; it does not redistribute copyrighted full text, supplementary tables, copied source tables, long evidence contexts, raw source documents, raw LLM outputs or internal processing logs.

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