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Record detail

One row in GLEAM-DB is one paper (PubMed) × one query variant. This page shows structured labels and provenance for that record, not a final variant classification.

Record identity

Record ID
543a84f6d1ba45b4d58a027e
Release version
webdb_threshold_completion_missing10_20260508
PMID
19706204 PubMed
Title
Encyclopaedia of tumour-associated familial disorders. Part I: from AIMAH to CHIME syndrome.
Journal
Hereditary cancer in clinical practice
Year
2008
DOI
10.1186/1897-4287-6-1-22
PMC
PMC2735164 PMC

Variant information

This section prioritizes normalized variant expressions where available. Non-standard source strings are not shown as canonical HGVS.

Gene
ATM
Query variant
NM_000051.4:c.7271T>C
Normalized c.HGVS
c.7271T>C
Normalized p.HGVS
p.(Val2424Ala)
Representative genomic HGVS
CM000673.1:g.108199929T>C
Genomic HGVS aliases
CM000673.1:g.108199929T>C; CM000673.2:g.108329202T>C; LRG_135:g.111371T>C; NC_000011.10:g.108329202T>C; NC_000011.8:g.107705139T>C; NC_000011.9:g.108199929T>C; and 2 more

CoGenEx-PM3 evidence

Evidence status is assigned at the PMID × variant level and should not be interpreted as a final variant-level pathogenicity classification.

Evidence status
No PM3 Evidence Identified
Query-evidence confidence
Not assessed
This record was not classified by the simple-SNV query-evidence audit.
PM3 conclusion
No PM3-relevant allelic-configuration evidence was identified for this PMID × variant record.
Patient-level evidence
No retained patient-level evidence was identified for this record.

Candidate context and target validation

Candidate context windows are places selected for audit because the query or its aliases may be relevant. They are not the same as a validated match to the target c.HGVS or p.HGVS expression.

Candidate context
Candidate context retained: 1 text window
Context status
Found in final retained audit context
Text candidate windows
1
Table candidate windows
0
Target c.HGVS validated
Yes
Target p.HGVS validated
No
Target validation
Target variant matched; no PM3 evidence identified

Source provenance

Reviewed source
Main article
Supplement used by audit
No
Supplement available
No
Reviewed document format
NXML/JATS full text
Evidence context scope
Primary audit context
Evidence location
Main article

Source links and copyright boundary

Use the PMID, PMC and DOI links above to inspect the source publication where access is permitted. GLEAM-DB redistributes structured metadata, evidence labels and provenance fields only; it does not redistribute copyrighted full text, supplementary tables, copied source tables, long evidence contexts, raw source documents, raw LLM outputs or internal processing logs.

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