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Record detail

One row in GLEAM-DB is one paper (PubMed) × one query variant. This page shows structured labels and provenance for that record, not a final variant classification.

Record identity

Record ID
36d286c6e3e2fe2b53dc4271
Release version
webdb_threshold_completion_missing10_20260508
PMID
40627234 PubMed
Title
High burden of variants of uncertain significance in early-onset colorectal cancer among indigenous African patients: a call for global research equity in cancer genetics.
Journal
Molecular biology reports
Year
2025
DOI
10.1007/s11033-025-10750-6
PMC
PMC12238126 PMC

Variant information

This section prioritizes normalized variant expressions where available. Non-standard source strings are not shown as canonical HGVS.

Gene
ERCC4
Query variant
NM_005236.3:c.1633G>A
Normalized c.HGVS
c.1633G>A
Normalized p.HGVS
p.(Gly545Arg)
Representative genomic HGVS
CM000678.1:g.14029422G>A
Genomic HGVS aliases
CM000678.1:g.14029422G>A; CM000678.2:g.13935565G>A; LRG_463:g.20409G>A; NC_000016.10:g.13935565G>A; NC_000016.8:g.13936923G>A; NC_000016.9:g.14029422G>A; and 1 more

CoGenEx-PM3 evidence

Evidence status is assigned at the PMID × variant level and should not be interpreted as a final variant-level pathogenicity classification.

Evidence status
Other Patient-Level Evidence
Query-evidence confidence
High confidence
Exact query c.HGVS was found in retained evidence.
Phase-confirmed PM3 evidence
No
Phase-unconfirmed biallelic evidence
No
Other patient-level evidence
Yes
PM3 context
Patient-level evidence found, not PM3
PM3 evidence items
0
Allelic configuration type
Other patient-level evidence

No retained PM3 partner variant was recorded for this PMID × variant pair.

Candidate context and target validation

Candidate context windows are places selected for audit because the query or its aliases may be relevant. They are not the same as a validated match to the target c.HGVS or p.HGVS expression.

Candidate context
Candidate context retained: 1 text window and 1 table window
Context status
Found in final retained audit context
Text candidate windows
1
Table candidate windows
1
Target c.HGVS validated
Yes
Target p.HGVS validated
Yes
Target validation
Target variant matched with other patient-level evidence

Source provenance

Reviewed source
Main article and supplement
Supplement used by audit
Yes
Supplement available
Yes
Reviewed document format
NXML/JATS full text
Evidence context scope
Primary audit context
Evidence location
Main+Supp

Source links and copyright boundary

Use the PMID, PMC and DOI links above to inspect the source publication where access is permitted. GLEAM-DB redistributes structured metadata, evidence labels and provenance fields only; it does not redistribute copyrighted full text, supplementary tables, copied source tables, long evidence contexts, raw source documents, raw LLM outputs or internal processing logs.

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