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Record detail

One row in GLEAM-DB is one paper (PubMed) × one query variant. This page shows structured labels and provenance for that record, not a final variant classification.

Record identity

Record ID
27b489a97e64bf1ed7c25608
Release version
v1.0
PMID
39035772 PubMed
Title
Whole Exome Sequencing in Vaccine-Induced Thrombotic Thrombocytopenia (VITT).
Journal
BioMed research international
Year
2024
PMC
PMC11260508 PMC

Variant information

This section prioritizes normalized variant expressions where available. Non-standard source strings are not shown as canonical HGVS.

Gene
ITGA2B
Query variant
NM_000419.5:c.457G>A
Normalized c.HGVS
c.457G>A
Normalized p.HGVS
p.(Ala153Thr)
Representative genomic HGVS
CM000679.1:g.42463036C>T
Genomic HGVS aliases
CM000679.1:g.42463036C>T; CM000679.2:g.44385668C>T; LRG_479:g.8838G>A; NC_000017.10:g.42463036C>T; NC_000017.11:g.44385668C>T; NC_000017.9:g.39818562C>T; and 1 more

CoGenEx-PM3 evidence

Evidence status is assigned at the PMID × variant level and should not be interpreted as a final variant-level pathogenicity classification.

Evidence status
Other Patient-Level Evidence
Query-evidence confidence
High confidence
Exact query c.HGVS was found in retained evidence.
Phase-confirmed PM3 evidence
No
Phase-unconfirmed biallelic evidence
No
Other patient-level evidence
Yes
PM3 context
Patient-level evidence found, not PM3
PM3 evidence items
0
Allelic configuration type
Other patient-level evidence

No retained PM3 partner variant was recorded for this PMID × variant pair.

Candidate context and target validation

Candidate context windows are places selected for audit because the query or its aliases may be relevant. They are not the same as a validated match to the target c.HGVS or p.HGVS expression.

Candidate context
No candidate context window was retained
Context status
Found in final retained audit context
Text candidate windows
0
Table candidate windows
0
Target c.HGVS validated
Yes
Target p.HGVS validated
Yes
Target validation
Not recorded

Source provenance

Reviewed source
Main article and supplement
Supplement used by audit
Yes
Supplement available
Yes
Reviewed document format
NXML/JATS full text
Evidence context scope
Primary audit context
Evidence location
Main+Supp

Source links and copyright boundary

Use the PMID, PMC and DOI links above to inspect the source publication where access is permitted. GLEAM-DB redistributes structured metadata, evidence labels and provenance fields only; it does not redistribute copyrighted full text, supplementary tables, copied source tables, long evidence contexts, raw source documents, raw LLM outputs or internal processing logs.

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